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<ArticleSet>
<Article>
<Journal>
				<PublisherName>University of Isfahan</PublisherName>
				<JournalTitle>Journal of Microbial Biology</JournalTitle>
				<Issn>3060-7647</Issn>
				<Volume>9</Volume>
				<Issue>34</Issue>
				<PubDate PubStatus="epublish">
					<Year>2020</Year>
					<Month>06</Month>
					<Day>21</Day>
				</PubDate>
			</Journal>
<ArticleTitle>Identifying Uricase-Producing Arthrobacter and Bordetella Bacterial Strains and Comparing the Enzyme Activity</ArticleTitle>
<VernacularTitle>Identifying Uricase-Producing Arthrobacter and Bordetella Bacterial Strains and Comparing the Enzyme Activity</VernacularTitle>
			<FirstPage>1</FirstPage>
			<LastPage>12</LastPage>
			<ELocationID EIdType="pii">24967</ELocationID>
			
<ELocationID EIdType="doi">10.22108/bjm.2020.119988.1235</ELocationID>
			
			<Language>FA</Language>
<AuthorList>
<Author>
					<FirstName>Mojtaba</FirstName>
					<LastName>Shaban</LastName>
<Affiliation>Department of biology, faculty of sciences, Shahid Bahonar University of Kerman, Kerman, Iran</Affiliation>

</Author>
<Author>
					<FirstName>Arastoo</FirstName>
					<LastName>Badoei-dalfard</LastName>
<Affiliation>Faculty of science, shahid bahonar university of kerman</Affiliation>

</Author>
</AuthorList>
				<PublicationType>Journal Article</PublicationType>
			<History>
				<PubDate PubStatus="received">
					<Year>2019</Year>
					<Month>11</Month>
					<Day>11</Day>
				</PubDate>
			</History>
		<Abstract>&lt;strong&gt;Introduction:&lt;/strong&gt; Uricase (urate oxidase) is a therapeutic enzyme that belongs to the class of oxidoreductases and catalyzes the oxidation of uric acid to allantoin, carbon dioxide, and hydrogen peroxide and also plays a vital role in the purine metabolic pathway. Nowadays, bacterial uricase enzyme has received special attention from researchers. &lt;br /&gt;&lt;strong&gt;Materials and methods:&lt;/strong&gt; Poultry soils are great places for the growth of uricotelic bacteria due to having high sources of uric acid. Poultry soils were collected from Kerman city and bacterial strains were isolated. The decomposition of uric acid was performed by inoculating bacteria on a solid medium containing uric acid as the only source of carbon and nitrogen. The screening was performed by monitoring the appearance of clear zones around the colonies of bacteria indicating the decomposition of uric acid. Uricase activity was investigated by the Phosphotungstic acid method. The molecular identification of strains was performed using 16S rDNA gene sequence and drawing the phylogenetic tree. &lt;br /&gt;&lt;strong&gt;Results:&lt;/strong&gt; In this study, two bacterial species capable of producing uricase enzyme were isolated from a poultry source and screened based on the size of the clear zone using a uric acid agar plate. &lt;em&gt;Arthrobacter &lt;/em&gt;sp.KBUBand &lt;em&gt;Bordetella &lt;/em&gt;sp.KMU3 strains were identified based on the 16S rDNA gene sequences. The production of uricase was performed during different incubation periods and the results showed that the maximum uricolytic activity of 25 and 15 U/mL was achieved by &lt;em&gt;Arthrobacter &lt;/em&gt;sp.KBUBand &lt;em&gt;Bordetella &lt;/em&gt;sp.KMU3, respectively. &lt;br /&gt;&lt;strong&gt;Discussion and conclusion:&lt;/strong&gt; The capability of both these strains to produce uricase was confirmed using solid and liquid media. &lt;em&gt;Arthrobacter &lt;/em&gt;sp.KBUB has shown a high ability to produce uricase, which can be used as a therapeutic enzyme and biosensor construction to measure uric acid.</Abstract>
			<OtherAbstract Language="FA">&lt;strong&gt;Introduction:&lt;/strong&gt; Uricase (urate oxidase) is a therapeutic enzyme that belongs to the class of oxidoreductases and catalyzes the oxidation of uric acid to allantoin, carbon dioxide, and hydrogen peroxide and also plays a vital role in the purine metabolic pathway. Nowadays, bacterial uricase enzyme has received special attention from researchers. &lt;br /&gt;&lt;strong&gt;Materials and methods:&lt;/strong&gt; Poultry soils are great places for the growth of uricotelic bacteria due to having high sources of uric acid. Poultry soils were collected from Kerman city and bacterial strains were isolated. The decomposition of uric acid was performed by inoculating bacteria on a solid medium containing uric acid as the only source of carbon and nitrogen. The screening was performed by monitoring the appearance of clear zones around the colonies of bacteria indicating the decomposition of uric acid. Uricase activity was investigated by the Phosphotungstic acid method. The molecular identification of strains was performed using 16S rDNA gene sequence and drawing the phylogenetic tree. &lt;br /&gt;&lt;strong&gt;Results:&lt;/strong&gt; In this study, two bacterial species capable of producing uricase enzyme were isolated from a poultry source and screened based on the size of the clear zone using a uric acid agar plate. &lt;em&gt;Arthrobacter &lt;/em&gt;sp.KBUBand &lt;em&gt;Bordetella &lt;/em&gt;sp.KMU3 strains were identified based on the 16S rDNA gene sequences. The production of uricase was performed during different incubation periods and the results showed that the maximum uricolytic activity of 25 and 15 U/mL was achieved by &lt;em&gt;Arthrobacter &lt;/em&gt;sp.KBUBand &lt;em&gt;Bordetella &lt;/em&gt;sp.KMU3, respectively. &lt;br /&gt;&lt;strong&gt;Discussion and conclusion:&lt;/strong&gt; The capability of both these strains to produce uricase was confirmed using solid and liquid media. &lt;em&gt;Arthrobacter &lt;/em&gt;sp.KBUB has shown a high ability to produce uricase, which can be used as a therapeutic enzyme and biosensor construction to measure uric acid.</OtherAbstract>
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			<Param Name="value">bacterial uricase</Param>
			</Object>
			<Object Type="keyword">
			<Param Name="value">Screening</Param>
			</Object>
			<Object Type="keyword">
			<Param Name="value">Production</Param>
			</Object>
			<Object Type="keyword">
			<Param Name="value">Molecular identification</Param>
			</Object>
			<Object Type="keyword">
			<Param Name="value">Arthrobacter</Param>
			</Object>
			<Object Type="keyword">
			<Param Name="value">Bordetella</Param>
			</Object>
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<ArchiveCopySource DocType="pdf">https://bjm.ui.ac.ir/article_24967_72b451532a72d6a5cfbb74e5222f6ecb.pdf</ArchiveCopySource>
</Article>

<Article>
<Journal>
				<PublisherName>University of Isfahan</PublisherName>
				<JournalTitle>Journal of Microbial Biology</JournalTitle>
				<Issn>3060-7647</Issn>
				<Volume>9</Volume>
				<Issue>34</Issue>
				<PubDate PubStatus="epublish">
					<Year>2020</Year>
					<Month>06</Month>
					<Day>21</Day>
				</PubDate>
			</Journal>
<ArticleTitle>A Phenotypic and Genotypic Study of Colistin arn Resistance Regulator Gene Classes in Acinetobacter Baumannii isolated from Clinical Cases using Multiplex PCR</ArticleTitle>
<VernacularTitle>A Phenotypic and Genotypic Study of Colistin arn Resistance Regulator Gene Classes in Acinetobacter Baumannii isolated from Clinical Cases using Multiplex PCR</VernacularTitle>
			<FirstPage>13</FirstPage>
			<LastPage>21</LastPage>
			<ELocationID EIdType="pii">24757</ELocationID>
			
<ELocationID EIdType="doi">10.22108/bjm.2020.120342.1248</ELocationID>
			
			<Language>FA</Language>
<AuthorList>
<Author>
					<FirstName>Farnoosh</FirstName>
					<LastName>Karimi</LastName>
<Affiliation>Department of Microbiology, Faculty of Basic Sciences, Saveh Branch, Islamic Azad University, Saveh, Iran</Affiliation>

</Author>
<Author>
					<FirstName>Kumarss</FirstName>
					<LastName>Amini</LastName>
<Affiliation>Department of Microbiology, School of Basic Sciences, Saveh Branch, Islamic Azad University, Saveh, Iran.</Affiliation>
<Identifier Source="ORCID">0000-0002-6419-3417</Identifier>

</Author>
<Author>
					<FirstName>Gholamreza</FirstName>
					<LastName>Javadi</LastName>
<Affiliation>Department of Microbiology, Faculty of Basic Sciences, Saveh Branch, Islamic Azad University, Saveh, Iran</Affiliation>

</Author>
</AuthorList>
				<PublicationType>Journal Article</PublicationType>
			<History>
				<PubDate PubStatus="received">
					<Year>2019</Year>
					<Month>12</Month>
					<Day>25</Day>
				</PubDate>
			</History>
		<Abstract>&lt;strong&gt;Introduction:&lt;/strong&gt; Colistin is considered as the last line of treatment in nosocomial infections caused by &lt;em&gt;Acinetobacter baumannii&lt;/em&gt;. Nowadays, with the elucidation of resistance transition mechanisms through &lt;em&gt;arn&lt;/em&gt; genes, a new drug resistance pattern has been observed in &lt;em&gt;Acinetobacter baumannii&lt;/em&gt; isolates. The aim of this study was to investigate the phenotypic and genotypic roles of the genes for regulating resistance to Colistin (&lt;em&gt;arn&lt;/em&gt;) in strains isolated from clinical cases. &lt;br /&gt;&lt;strong&gt;Materials and methods:&lt;/strong&gt; To conduct this descriptive study, after obtaining the written consent, 400 clinical samples were collected from patients admitted to Hazrat-e-Rasoul Hospital in Tehran. After the identification of the isolates using biochemical methods and &lt;em&gt;16srDNA&lt;/em&gt; analysis, the antibiotic resistance pattern of the isolates was determined by disk diffusion and molecular methods (to detect &lt;em&gt;arnT&lt;/em&gt;, &lt;em&gt;arnB&lt;/em&gt; genes)&lt;em&gt;.&lt;/em&gt; &lt;br /&gt;&lt;strong&gt;Results:&lt;/strong&gt; Sixty &lt;em&gt;Acinetobacter baumannii&lt;/em&gt; strains were isolated from 400 samples. The results of antibiotic resistance analysis showed that, in most cases, more than 38% of blood samples had Acinetobacter species. Also, no Acinetobacter was found in any of the spinal cord specimens, which showed the lowest infection rate (p &lt;0.05). There was also a significant difference between the antibiotic susceptibility of &lt;em&gt;Acinetobacter baumannii&lt;/em&gt; isolates to Colistin and other antibiotics (p &lt;0.05). In addition, Colistin resistant strains had &lt;em&gt;arnB&lt;/em&gt; and &lt;em&gt;arnT&lt;/em&gt; genes, which were considered statistically significant (p &lt;0.05) compared to other strains&lt;em&gt;.&lt;/em&gt; &lt;br /&gt;&lt;strong&gt;Discussion and conclusion:&lt;/strong&gt; Since Colistin is used as the last line of treatment, increased resistance to it can lead to increased mortality and hospital costs. Therefore, the application of new therapeutic regimens and greater sensitivity to the timely diagnosis and control of nosocomial infections seems necessary.</Abstract>
			<OtherAbstract Language="FA">&lt;strong&gt;Introduction:&lt;/strong&gt; Colistin is considered as the last line of treatment in nosocomial infections caused by &lt;em&gt;Acinetobacter baumannii&lt;/em&gt;. Nowadays, with the elucidation of resistance transition mechanisms through &lt;em&gt;arn&lt;/em&gt; genes, a new drug resistance pattern has been observed in &lt;em&gt;Acinetobacter baumannii&lt;/em&gt; isolates. The aim of this study was to investigate the phenotypic and genotypic roles of the genes for regulating resistance to Colistin (&lt;em&gt;arn&lt;/em&gt;) in strains isolated from clinical cases. &lt;br /&gt;&lt;strong&gt;Materials and methods:&lt;/strong&gt; To conduct this descriptive study, after obtaining the written consent, 400 clinical samples were collected from patients admitted to Hazrat-e-Rasoul Hospital in Tehran. After the identification of the isolates using biochemical methods and &lt;em&gt;16srDNA&lt;/em&gt; analysis, the antibiotic resistance pattern of the isolates was determined by disk diffusion and molecular methods (to detect &lt;em&gt;arnT&lt;/em&gt;, &lt;em&gt;arnB&lt;/em&gt; genes)&lt;em&gt;.&lt;/em&gt; &lt;br /&gt;&lt;strong&gt;Results:&lt;/strong&gt; Sixty &lt;em&gt;Acinetobacter baumannii&lt;/em&gt; strains were isolated from 400 samples. The results of antibiotic resistance analysis showed that, in most cases, more than 38% of blood samples had Acinetobacter species. Also, no Acinetobacter was found in any of the spinal cord specimens, which showed the lowest infection rate (p &lt;0.05). There was also a significant difference between the antibiotic susceptibility of &lt;em&gt;Acinetobacter baumannii&lt;/em&gt; isolates to Colistin and other antibiotics (p &lt;0.05). In addition, Colistin resistant strains had &lt;em&gt;arnB&lt;/em&gt; and &lt;em&gt;arnT&lt;/em&gt; genes, which were considered statistically significant (p &lt;0.05) compared to other strains&lt;em&gt;.&lt;/em&gt; &lt;br /&gt;&lt;strong&gt;Discussion and conclusion:&lt;/strong&gt; Since Colistin is used as the last line of treatment, increased resistance to it can lead to increased mortality and hospital costs. Therefore, the application of new therapeutic regimens and greater sensitivity to the timely diagnosis and control of nosocomial infections seems necessary.</OtherAbstract>
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			<Object Type="keyword">
			<Param Name="value">Colistin</Param>
			</Object>
			<Object Type="keyword">
			<Param Name="value">Acinetobacter</Param>
			</Object>
			<Object Type="keyword">
			<Param Name="value">Resistance</Param>
			</Object>
			<Object Type="keyword">
			<Param Name="value">arn gene</Param>
			</Object>
		</ObjectList>
<ArchiveCopySource DocType="pdf">https://bjm.ui.ac.ir/article_24757_1cdc99bc26d37dd9d73e72b4b532f726.pdf</ArchiveCopySource>
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<Article>
<Journal>
				<PublisherName>University of Isfahan</PublisherName>
				<JournalTitle>Journal of Microbial Biology</JournalTitle>
				<Issn>3060-7647</Issn>
				<Volume>9</Volume>
				<Issue>34</Issue>
				<PubDate PubStatus="epublish">
					<Year>2020</Year>
					<Month>06</Month>
					<Day>21</Day>
				</PubDate>
			</Journal>
<ArticleTitle>Optimizing the Cultivation Conditions of Fischerella sp. SH.A Cyanobacterium for Maximizing Polysaccharide Production with Antibacterial Activity</ArticleTitle>
<VernacularTitle>Optimizing the Cultivation Conditions of Fischerella sp. SH.A Cyanobacterium for Maximizing Polysaccharide Production with Antibacterial Activity</VernacularTitle>
			<FirstPage>23</FirstPage>
			<LastPage>53</LastPage>
			<ELocationID EIdType="pii">25036</ELocationID>
			
<ELocationID EIdType="doi">10.22108/bjm.2020.120846.1261</ELocationID>
			
			<Language>FA</Language>
<AuthorList>
<Author>
					<FirstName>Shadab</FirstName>
					<LastName>Abbaspour</LastName>
<Affiliation>Department of Biology, Faculty of science, Central Tehran Branch, Islamic Azad University, Tehran, Iran &amp;lrm;</Affiliation>

</Author>
<Author>
					<FirstName>Bahareh</FirstName>
					<LastName>Nowruzi</LastName>
<Affiliation>Department of Biology, Faculty of science, Science and Research Branch, Islamic Azad University, Tehran&amp;lrm;</Affiliation>
<Identifier Source="ORCID">0000-0001-6656-777X</Identifier>

</Author>
<Author>
					<FirstName>S. M. M</FirstName>
					<LastName>Hamdi</LastName>
<Affiliation>Department of Biology, Faculty of science, Central Tehran Branch, Islamic Azad University, Tehran, Iran</Affiliation>

</Author>
</AuthorList>
				<PublicationType>Journal Article</PublicationType>
			<History>
				<PubDate PubStatus="received">
					<Year>2019</Year>
					<Month>12</Month>
					<Day>31</Day>
				</PubDate>
			</History>
		<Abstract>&lt;strong&gt;Introduction:&lt;/strong&gt; Among the photosynthetic microorganisms, cyanobacteria belonging to the genus &lt;em&gt;Fischerella &lt;/em&gt;appear particularly promising for new polysaccharides producing strains. Extracellular polysaccharides (EPS) serve as a boundary to the immediate environment and play a protective role against antimicrobial agents. That iswhy cyanobacteria are so popular in the industry today as thickeners or floating agents, heavy metal absorbers, or in the case of sulfate polysaccharides as bioactive substances. This is an advantage over other polysaccharides extracted from plants or other macroalgae. There are many factors  affecting cell growth and metabolite accumulation in cell cultures. However, there is insufficient knowledge about the factors affecting maximal EPS biosynthesis and antibacterial activity. In this regard, in this paper, the effect of some physical, environmental, and nutritional factors on the simultaneous production of exopolysaccharide by &lt;em&gt;Fischerella&lt;/em&gt; sp. SH.A was investigated in order to select the best cultivation conditions for the industrial application of exopolysaccharides. &lt;br /&gt;&lt;strong&gt;Materials and methods:&lt;/strong&gt; In this study, the cyanobacterium isolated from the fresh water of Golestan province was undertaken with the aim of investigating the key factors regulating EPS biosynthesis and antibacterial activity. After the morphological and molecular identification, the possible correlations between the type of stress and the amount of polysaccharides production were also investigated. &lt;br /&gt;&lt;strong&gt;Results:&lt;/strong&gt; The obtained results indicated that EPS production and antibacterial activity were highly dependent on the culture conditions and light intensity. Furthermore, the production of exopolysaccharides in &lt;em&gt;non-diastrophic &lt;/em&gt;conditions was highly correlated with the concentration of nitrate up to &lt;em&gt;500 mM&lt;/em&gt; and the illumination of 50 or 150 microeinsteins per second per square meter. &lt;br /&gt;&lt;strong&gt;Discussion and conclusion:&lt;/strong&gt; Since cyanobacterial extracellular polysaccharides are interesting from the biotechnological point of view, considering some other parameters are of crucial importance for the maximization of EPS production in this genus.</Abstract>
			<OtherAbstract Language="FA">&lt;strong&gt;Introduction:&lt;/strong&gt; Among the photosynthetic microorganisms, cyanobacteria belonging to the genus &lt;em&gt;Fischerella &lt;/em&gt;appear particularly promising for new polysaccharides producing strains. Extracellular polysaccharides (EPS) serve as a boundary to the immediate environment and play a protective role against antimicrobial agents. That iswhy cyanobacteria are so popular in the industry today as thickeners or floating agents, heavy metal absorbers, or in the case of sulfate polysaccharides as bioactive substances. This is an advantage over other polysaccharides extracted from plants or other macroalgae. There are many factors  affecting cell growth and metabolite accumulation in cell cultures. However, there is insufficient knowledge about the factors affecting maximal EPS biosynthesis and antibacterial activity. In this regard, in this paper, the effect of some physical, environmental, and nutritional factors on the simultaneous production of exopolysaccharide by &lt;em&gt;Fischerella&lt;/em&gt; sp. SH.A was investigated in order to select the best cultivation conditions for the industrial application of exopolysaccharides. &lt;br /&gt;&lt;strong&gt;Materials and methods:&lt;/strong&gt; In this study, the cyanobacterium isolated from the fresh water of Golestan province was undertaken with the aim of investigating the key factors regulating EPS biosynthesis and antibacterial activity. After the morphological and molecular identification, the possible correlations between the type of stress and the amount of polysaccharides production were also investigated. &lt;br /&gt;&lt;strong&gt;Results:&lt;/strong&gt; The obtained results indicated that EPS production and antibacterial activity were highly dependent on the culture conditions and light intensity. Furthermore, the production of exopolysaccharides in &lt;em&gt;non-diastrophic &lt;/em&gt;conditions was highly correlated with the concentration of nitrate up to &lt;em&gt;500 mM&lt;/em&gt; and the illumination of 50 or 150 microeinsteins per second per square meter. &lt;br /&gt;&lt;strong&gt;Discussion and conclusion:&lt;/strong&gt; Since cyanobacterial extracellular polysaccharides are interesting from the biotechnological point of view, considering some other parameters are of crucial importance for the maximization of EPS production in this genus.</OtherAbstract>
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			<Object Type="keyword">
			<Param Name="value">Cyanobacteria</Param>
			</Object>
			<Object Type="keyword">
			<Param Name="value">Extracellular Polysaccharide</Param>
			</Object>
			<Object Type="keyword">
			<Param Name="value">Fischerella sp. SH.A</Param>
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			<Object Type="keyword">
			<Param Name="value">Optimization</Param>
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<ArchiveCopySource DocType="pdf">https://bjm.ui.ac.ir/article_25036_553f3857aa2a4351cd33c6a171f45704.pdf</ArchiveCopySource>
</Article>

<Article>
<Journal>
				<PublisherName>University of Isfahan</PublisherName>
				<JournalTitle>Journal of Microbial Biology</JournalTitle>
				<Issn>3060-7647</Issn>
				<Volume>9</Volume>
				<Issue>34</Issue>
				<PubDate PubStatus="epublish">
					<Year>2020</Year>
					<Month>06</Month>
					<Day>21</Day>
				</PubDate>
			</Journal>
<ArticleTitle>A Phylogenetic Analysis of HC-Pro Protein in Iranian Isolates of Bean Yellow Mosaic Virus</ArticleTitle>
<VernacularTitle>A Phylogenetic Analysis of HC-Pro Protein in Iranian Isolates of Bean Yellow Mosaic Virus</VernacularTitle>
			<FirstPage>55</FirstPage>
			<LastPage>70</LastPage>
			<ELocationID EIdType="pii">25011</ELocationID>
			
<ELocationID EIdType="doi">10.22108/bjm.2020.120883.1262</ELocationID>
			
			<Language>FA</Language>
<AuthorList>
<Author>
					<FirstName>Ali</FirstName>
					<LastName>Baradar</LastName>
<Affiliation>Department of Plant Protection, Faculty of Agriculture, Vali-e-University of Rafsanjan, Iran</Affiliation>

</Author>
<Author>
					<FirstName>Ahmad</FirstName>
					<LastName>Hosseini</LastName>
<Affiliation>Department of Plant Protection, Faculty of Agriculture, Vali-e-University of Rafsanjan, Iran</Affiliation>

</Author>
<Author>
					<FirstName>Samin</FirstName>
					<LastName>Hosseini</LastName>
<Affiliation>Department of Plant Protection, Faculty of Agriculture, Vali-e-University of Rafsanjan, Iran</Affiliation>

</Author>
<Author>
					<FirstName>Somayeh</FirstName>
					<LastName>Abdani Babaki</LastName>
<Affiliation>Department of Plant Protection, Faculty of Agriculture, Vali-e-University of Rafsanjan, Iran</Affiliation>

</Author>
</AuthorList>
				<PublicationType>Journal Article</PublicationType>
			<History>
				<PubDate PubStatus="received">
					<Year>2020</Year>
					<Month>01</Month>
					<Day>12</Day>
				</PubDate>
			</History>
		<Abstract>&lt;strong&gt;مقدمه:&lt;/strong&gt; ویروس موزاییک زرد لوبیا (&lt;em&gt;Bean yellow mosaic virus&lt;/em&gt;)به جنس &lt;em&gt;Potyvirus&lt;/em&gt; و خانوادۀ &lt;em&gt;Potyviridae&lt;/em&gt;تعلقدارد و دارای پراکندگی جهانی گسترده و دامنۀ میزبانی وسیع است. در پژوهش حاضر، روابط فیلوژنتیکی 8 جدایۀ این ویروس که در سال‌های زراعی 96 و 97 از مناطق جغرافیایی مختلف ایران (آذربایجان شرقی، اردبیل، قزوین، زنجان، همدان، خوزستان، فارس و کرمان) از روی باقلا جدا شده بودند، در مقایسه با سایر جدایه‌های موجود در بانک ژن بررسی شدند. &lt;br /&gt;&lt;strong&gt;مواد و روش‏‏ها:&lt;/strong&gt; برگ‌های گیاهان دارای نشانه‌های ویروسی از مزارع باقلای نواحی مختلف ایران نمونه‏برداری و به آزمایشگاه منتقل شدند. به‌منظور تشخیص نمونه‌های آلوده به ویروس موزاییک زرد لوبیا، ابتدا از آزمون داس الیزا و آنتی‌بادی اختصاصی ویروس استفاده شد؛ سپس RNA کل نمونه‌های آلوده استخراج و ناحیۀ HC-Proجدایه‌های انتخابی تکثیر و توالی‌یابی شد. ارزیابی توالی، بررسی روابط فیلوژنتیکی، بررسی ساختار پروتئینی و همچنین شناسایی وقوع نوترکیبی در ناحیۀ HC جدایه‌های BYMV انتخابی با نرم‌افزارهای مختلف انجام شد. &lt;br /&gt;&lt;strong&gt;نتایج: &lt;/strong&gt;در درخت فیلوژنتیکی رسم‌شده، جدایه‌های ایرانی در دو گروه مونوفیلتیک مجزا قرار گرفتند؛ به‌طوری‌که پنج جدایۀ آذربایجان‌ شرقی، قزوین، زنجان، فارس و کرمان در کنار دو جدایه از استرالیا و ژاپن که همگی از روی باقلا جدا شده بودند، در یک گروه جای گرفتند و جدایه‌ها‌‌ی اردبیل، همدان و خوزستان به همراه دو جدایۀ دیگر ایرانی موجود در بانک ژن، دو جدایه از هند و دو جدایه از ژاپن در گروه دیگر قرار گرفتند. بر اساس نتایج آزمون نوترکیبی، هیچ‌کدام از جدایه‌های ایرانی جمع‌آوری‌شده در پژوهش حاضر، جدایۀ نوترکیب تشخیص داده نشدند. &lt;br /&gt;&lt;strong&gt;بحث و نتیجه‏گیری:&lt;/strong&gt; درک تغییرات ژنتیکی و نوترکیبی جمعیت ویروسی پیش‌نیاز مهمی برای تشخیص کارآمد، مدیریت مؤثر و کنترل بیماری در درازمدت است. قطعاً نتایج در توسعۀ راهکار‌هایی کاربرد دارند که به مقاومت در برابر &lt;strong&gt;BYMV&lt;/strong&gt; منتج می‌شوند و چنانچه این بیماری در آینده همه‌گیر شود، می‌توانند در راستای اتخاذ راهبردهای مدیریتی اثربخش باشند.</Abstract>
			<OtherAbstract Language="FA">&lt;strong&gt;مقدمه:&lt;/strong&gt; ویروس موزاییک زرد لوبیا (&lt;em&gt;Bean yellow mosaic virus&lt;/em&gt;)به جنس &lt;em&gt;Potyvirus&lt;/em&gt; و خانوادۀ &lt;em&gt;Potyviridae&lt;/em&gt;تعلقدارد و دارای پراکندگی جهانی گسترده و دامنۀ میزبانی وسیع است. در پژوهش حاضر، روابط فیلوژنتیکی 8 جدایۀ این ویروس که در سال‌های زراعی 96 و 97 از مناطق جغرافیایی مختلف ایران (آذربایجان شرقی، اردبیل، قزوین، زنجان، همدان، خوزستان، فارس و کرمان) از روی باقلا جدا شده بودند، در مقایسه با سایر جدایه‌های موجود در بانک ژن بررسی شدند. &lt;br /&gt;&lt;strong&gt;مواد و روش‏‏ها:&lt;/strong&gt; برگ‌های گیاهان دارای نشانه‌های ویروسی از مزارع باقلای نواحی مختلف ایران نمونه‏برداری و به آزمایشگاه منتقل شدند. به‌منظور تشخیص نمونه‌های آلوده به ویروس موزاییک زرد لوبیا، ابتدا از آزمون داس الیزا و آنتی‌بادی اختصاصی ویروس استفاده شد؛ سپس RNA کل نمونه‌های آلوده استخراج و ناحیۀ HC-Proجدایه‌های انتخابی تکثیر و توالی‌یابی شد. ارزیابی توالی، بررسی روابط فیلوژنتیکی، بررسی ساختار پروتئینی و همچنین شناسایی وقوع نوترکیبی در ناحیۀ HC جدایه‌های BYMV انتخابی با نرم‌افزارهای مختلف انجام شد. &lt;br /&gt;&lt;strong&gt;نتایج: &lt;/strong&gt;در درخت فیلوژنتیکی رسم‌شده، جدایه‌های ایرانی در دو گروه مونوفیلتیک مجزا قرار گرفتند؛ به‌طوری‌که پنج جدایۀ آذربایجان‌ شرقی، قزوین، زنجان، فارس و کرمان در کنار دو جدایه از استرالیا و ژاپن که همگی از روی باقلا جدا شده بودند، در یک گروه جای گرفتند و جدایه‌ها‌‌ی اردبیل، همدان و خوزستان به همراه دو جدایۀ دیگر ایرانی موجود در بانک ژن، دو جدایه از هند و دو جدایه از ژاپن در گروه دیگر قرار گرفتند. بر اساس نتایج آزمون نوترکیبی، هیچ‌کدام از جدایه‌های ایرانی جمع‌آوری‌شده در پژوهش حاضر، جدایۀ نوترکیب تشخیص داده نشدند. &lt;br /&gt;&lt;strong&gt;بحث و نتیجه‏گیری:&lt;/strong&gt; درک تغییرات ژنتیکی و نوترکیبی جمعیت ویروسی پیش‌نیاز مهمی برای تشخیص کارآمد، مدیریت مؤثر و کنترل بیماری در درازمدت است. قطعاً نتایج در توسعۀ راهکار‌هایی کاربرد دارند که به مقاومت در برابر &lt;strong&gt;BYMV&lt;/strong&gt; منتج می‌شوند و چنانچه این بیماری در آینده همه‌گیر شود، می‌توانند در راستای اتخاذ راهبردهای مدیریتی اثربخش باشند.</OtherAbstract>
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			<Param Name="value">تحلیل فیلوژنتیکی</Param>
			</Object>
			<Object Type="keyword">
			<Param Name="value">آرایه‌بندی</Param>
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			<Param Name="value">HC-Pro</Param>
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<Article>
<Journal>
				<PublisherName>University of Isfahan</PublisherName>
				<JournalTitle>Journal of Microbial Biology</JournalTitle>
				<Issn>3060-7647</Issn>
				<Volume>9</Volume>
				<Issue>34</Issue>
				<PubDate PubStatus="epublish">
					<Year>2020</Year>
					<Month>06</Month>
					<Day>21</Day>
				</PubDate>
			</Journal>
<ArticleTitle>Optimization of L-asparaginase Production from a Lactobacillus sp. isolated from Traditional Dairy Products</ArticleTitle>
<VernacularTitle>Optimization of L-asparaginase Production from a Lactobacillus sp. isolated from Traditional Dairy Products</VernacularTitle>
			<FirstPage>71</FirstPage>
			<LastPage>86</LastPage>
			<ELocationID EIdType="pii">24990</ELocationID>
			
<ELocationID EIdType="doi">10.22108/bjm.2020.121143.1283</ELocationID>
			
			<Language>FA</Language>
<AuthorList>
<Author>
					<FirstName>Behnush</FirstName>
					<LastName>Dinarvand</LastName>
<Affiliation>Department of Biology, Faculty of Basic Sciences, University of Maragheh, Maragheh, Iran</Affiliation>

</Author>
<Author>
					<FirstName>Parisa</FirstName>
					<LastName>Fathi Rezaei</LastName>
<Affiliation>Department of Biology, Faculty of Science, University of Maragheh, Maragheh, Iran.</Affiliation>

</Author>
<Author>
					<FirstName>Neda</FirstName>
					<LastName>Akbari</LastName>
<Affiliation>Department of Microbiology, Faculty of Science, Islamic Azad University, Arak Branch, Arak, Iran</Affiliation>

</Author>
</AuthorList>
				<PublicationType>Journal Article</PublicationType>
			<History>
				<PubDate PubStatus="received">
					<Year>2020</Year>
					<Month>03</Month>
					<Day>15</Day>
				</PubDate>
			</History>
		<Abstract>&lt;strong&gt;Introduction:&lt;/strong&gt; Asparaginase catalyzes the deamination of asparagine into aspartate and ammonia. Currently, it is used as an important chemotherapeutic agent for the treatment of different cancers such as acute lymphoblastic leukemia, malignant diseases of the lymphoid system, and Non-Hodgkin Lymphoma (NHL). Asparaginase is a useful enzyme for the food industry due to its potential to prevent acrylamide formation and to maintain the quality of the food. Probiotic products contain useful bacteria that have beneficial effects on health. The most important biological properties of probiotics include the elimination of mutagenic and carcinogenic agents. There are many microorganisms that could potentially function as the probiotic, the most common of which are &lt;em&gt;Lactobacillus&lt;/em&gt; and &lt;em&gt;Bifidobacterium&lt;/em&gt; species. The aim of this study was to optimize the production of L-asparaginase from isolated &lt;em&gt;Lactobacillus&lt;/em&gt; sp. from the traditional whey of Maragheh. &lt;br /&gt;&lt;strong&gt;Materials and methods:&lt;/strong&gt; The isolate was investigated through microbial and biochemical tests including gram staining, catalase and oxidase activity, fermentation of carbohydrates, and acid and bile salts resistance. Asparaginase production was evaluated by qualitative and quantitative methods, rapid plate assay, and Imada method, respectively. Asparaginase production was optimized by the Response Surface Method (RSM). &lt;br /&gt;&lt;strong&gt;Results:&lt;/strong&gt; According to the RSM results, the highest activity of asparaginase was 131 U/mg, which was 11% more than the non-optimized condition. The optimized parameters composed of asparagine (1.75 %), glucose (2 %), and yeast extract (1.25 %). Furthermore, the total protein content and biomass of the optimized medium were 0.893 mg/ml and 0.345 g, respectively. &lt;br /&gt;&lt;strong&gt;Discussion and conclusion:&lt;/strong&gt; This isolated lactobacilli strain may be considered as a significant source for the production of the enzyme with the pharmacological value of asparaginase.</Abstract>
			<OtherAbstract Language="FA">&lt;strong&gt;Introduction:&lt;/strong&gt; Asparaginase catalyzes the deamination of asparagine into aspartate and ammonia. Currently, it is used as an important chemotherapeutic agent for the treatment of different cancers such as acute lymphoblastic leukemia, malignant diseases of the lymphoid system, and Non-Hodgkin Lymphoma (NHL). Asparaginase is a useful enzyme for the food industry due to its potential to prevent acrylamide formation and to maintain the quality of the food. Probiotic products contain useful bacteria that have beneficial effects on health. The most important biological properties of probiotics include the elimination of mutagenic and carcinogenic agents. There are many microorganisms that could potentially function as the probiotic, the most common of which are &lt;em&gt;Lactobacillus&lt;/em&gt; and &lt;em&gt;Bifidobacterium&lt;/em&gt; species. The aim of this study was to optimize the production of L-asparaginase from isolated &lt;em&gt;Lactobacillus&lt;/em&gt; sp. from the traditional whey of Maragheh. &lt;br /&gt;&lt;strong&gt;Materials and methods:&lt;/strong&gt; The isolate was investigated through microbial and biochemical tests including gram staining, catalase and oxidase activity, fermentation of carbohydrates, and acid and bile salts resistance. Asparaginase production was evaluated by qualitative and quantitative methods, rapid plate assay, and Imada method, respectively. Asparaginase production was optimized by the Response Surface Method (RSM). &lt;br /&gt;&lt;strong&gt;Results:&lt;/strong&gt; According to the RSM results, the highest activity of asparaginase was 131 U/mg, which was 11% more than the non-optimized condition. The optimized parameters composed of asparagine (1.75 %), glucose (2 %), and yeast extract (1.25 %). Furthermore, the total protein content and biomass of the optimized medium were 0.893 mg/ml and 0.345 g, respectively. &lt;br /&gt;&lt;strong&gt;Discussion and conclusion:&lt;/strong&gt; This isolated lactobacilli strain may be considered as a significant source for the production of the enzyme with the pharmacological value of asparaginase.</OtherAbstract>
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			<Object Type="keyword">
			<Param Name="value">L-Asparagine</Param>
			</Object>
			<Object Type="keyword">
			<Param Name="value">Acrylamide</Param>
			</Object>
			<Object Type="keyword">
			<Param Name="value">Pharmaceutical Enzyme</Param>
			</Object>
			<Object Type="keyword">
			<Param Name="value">Acute Lymphoblastic Leukemia</Param>
			</Object>
			<Object Type="keyword">
			<Param Name="value">Nitrogen metabolism</Param>
			</Object>
		</ObjectList>
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</Article>

<Article>
<Journal>
				<PublisherName>University of Isfahan</PublisherName>
				<JournalTitle>Journal of Microbial Biology</JournalTitle>
				<Issn>3060-7647</Issn>
				<Volume>9</Volume>
				<Issue>34</Issue>
				<PubDate PubStatus="epublish">
					<Year>2020</Year>
					<Month>06</Month>
					<Day>21</Day>
				</PubDate>
			</Journal>
<ArticleTitle>Investigating the Effect of Hydrogen Peroxide on Biomass and Morphophysiological Indices of Microalga Dunaliella Salina Pretreated by Four Phytohormones: Auxin, Gibberellin, Cytokinin, and Salicylic Acid</ArticleTitle>
<VernacularTitle>Investigating the Effect of Hydrogen Peroxide on Biomass and Morphophysiological Indices of Microalga Dunaliella Salina Pretreated by Four Phytohormones: Auxin, Gibberellin, Cytokinin, and Salicylic Acid</VernacularTitle>
			<FirstPage>87</FirstPage>
			<LastPage>104</LastPage>
			<ELocationID EIdType="pii">24978</ELocationID>
			
<ELocationID EIdType="doi">10.22108/bjm.2020.122183.1285</ELocationID>
			
			<Language>FA</Language>
<AuthorList>
<Author>
					<FirstName>Azin</FirstName>
					<LastName>Ghafarizadeh</LastName>
<Affiliation>Department of Biology Plant Physiology, Faculty of Science, Lorestan University, Khoramabad, Iran</Affiliation>

</Author>
<Author>
					<FirstName>Maryam</FirstName>
					<LastName>Madadkar Haghjou</LastName>
<Affiliation>Department of Biology Plant Physiology, Faculty of Science, Lorestan University, Khoramabad, Iran</Affiliation>

</Author>
</AuthorList>
				<PublicationType>Journal Article</PublicationType>
			<History>
				<PubDate PubStatus="received">
					<Year>2020</Year>
					<Month>03</Month>
					<Day>18</Day>
				</PubDate>
			</History>
		<Abstract>&lt;strong&gt;Introduction:&lt;/strong&gt; Under unfavorable conditions, Reactive Oxygen Species (ROS) are produced inside living cells. Oxidant molecules such as H&lt;sub&gt;2&lt;/sub&gt;O&lt;sub&gt;2&lt;/sub&gt; could be used to study the microorganism responses to oxidative stress. The treatment of algae with phytohormones can improve their physiological indices. In this study, the effect of H&lt;sub&gt;2&lt;/sub&gt;O&lt;sub&gt;2&lt;/sub&gt; on unicellular green alga&lt;em&gt; Dunaliella salina, &lt;/em&gt;pretreated by IAA (auxin), GA3 (gibberellin), Cyt (cytokinin), and SA (salicylic acid) was studied at three concentrations. &lt;br /&gt;&lt;strong&gt;Materials and methods:&lt;/strong&gt; A 23-days algal culture was treated by phytohormones (in three repetitions) at three concentrations, and two days later (day 25), H&lt;sub&gt;2&lt;/sub&gt;O&lt;sub&gt;2&lt;/sub&gt; (0.1 mM) treatment was performed. Two controls were considered without hormone and without H&lt;sub&gt;2&lt;/sub&gt;O&lt;sub&gt;2&lt;/sub&gt;, respectively. Evaluation of the growth and number of cells, fresh and dry weights, cell size (length, width, and volume), Chl &lt;em&gt;a&lt;/em&gt; and &lt;em&gt;b&lt;/em&gt;, beta-carotene, soluble carbohydrate, and protein were performed in days 25 and 27. &lt;br /&gt;&lt;strong&gt;Results:&lt;/strong&gt; Hormones in most cases significantly improved the Indices (compared to the hormone-free control sample) (p &lt;0.05). H&lt;sub&gt;2&lt;/sub&gt;O&lt;sub&gt;2 &lt;/sub&gt;treatment, two days after pre-treatment with hormones, caused the improvement of indices in most cases, except for protein and beta carotene. In contrast to the protein, the amount of carbohydrate was not sensitive to H&lt;sub&gt;2&lt;/sub&gt;O&lt;sub&gt;2. &lt;/sub&gt;The best results were obtained with IAA at medium concentration, GA3 at high concentration, Cyt and SA at low concentration. &lt;br /&gt;&lt;strong&gt;Discussion and conclusion:&lt;/strong&gt; H&lt;sub&gt;2&lt;/sub&gt;O&lt;sub&gt;2&lt;/sub&gt; positively influenced the effects of the four phytohormones on algae cells, especially in relation to increased algal biomass and cell division. The positive effect of H&lt;sub&gt;2&lt;/sub&gt;O&lt;sub&gt;2 &lt;/sub&gt;treatment on both pretreated with or without hormones was probably due to its concentration which was lower than the toxicity level. Therefore, algal cells have benefited more from the useful and signaling effects of this molecule.</Abstract>
			<OtherAbstract Language="FA">&lt;strong&gt;Introduction:&lt;/strong&gt; Under unfavorable conditions, Reactive Oxygen Species (ROS) are produced inside living cells. Oxidant molecules such as H&lt;sub&gt;2&lt;/sub&gt;O&lt;sub&gt;2&lt;/sub&gt; could be used to study the microorganism responses to oxidative stress. The treatment of algae with phytohormones can improve their physiological indices. In this study, the effect of H&lt;sub&gt;2&lt;/sub&gt;O&lt;sub&gt;2&lt;/sub&gt; on unicellular green alga&lt;em&gt; Dunaliella salina, &lt;/em&gt;pretreated by IAA (auxin), GA3 (gibberellin), Cyt (cytokinin), and SA (salicylic acid) was studied at three concentrations. &lt;br /&gt;&lt;strong&gt;Materials and methods:&lt;/strong&gt; A 23-days algal culture was treated by phytohormones (in three repetitions) at three concentrations, and two days later (day 25), H&lt;sub&gt;2&lt;/sub&gt;O&lt;sub&gt;2&lt;/sub&gt; (0.1 mM) treatment was performed. Two controls were considered without hormone and without H&lt;sub&gt;2&lt;/sub&gt;O&lt;sub&gt;2&lt;/sub&gt;, respectively. Evaluation of the growth and number of cells, fresh and dry weights, cell size (length, width, and volume), Chl &lt;em&gt;a&lt;/em&gt; and &lt;em&gt;b&lt;/em&gt;, beta-carotene, soluble carbohydrate, and protein were performed in days 25 and 27. &lt;br /&gt;&lt;strong&gt;Results:&lt;/strong&gt; Hormones in most cases significantly improved the Indices (compared to the hormone-free control sample) (p &lt;0.05). H&lt;sub&gt;2&lt;/sub&gt;O&lt;sub&gt;2 &lt;/sub&gt;treatment, two days after pre-treatment with hormones, caused the improvement of indices in most cases, except for protein and beta carotene. In contrast to the protein, the amount of carbohydrate was not sensitive to H&lt;sub&gt;2&lt;/sub&gt;O&lt;sub&gt;2. &lt;/sub&gt;The best results were obtained with IAA at medium concentration, GA3 at high concentration, Cyt and SA at low concentration. &lt;br /&gt;&lt;strong&gt;Discussion and conclusion:&lt;/strong&gt; H&lt;sub&gt;2&lt;/sub&gt;O&lt;sub&gt;2&lt;/sub&gt; positively influenced the effects of the four phytohormones on algae cells, especially in relation to increased algal biomass and cell division. The positive effect of H&lt;sub&gt;2&lt;/sub&gt;O&lt;sub&gt;2 &lt;/sub&gt;treatment on both pretreated with or without hormones was probably due to its concentration which was lower than the toxicity level. Therefore, algal cells have benefited more from the useful and signaling effects of this molecule.</OtherAbstract>
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